Class Bio::EMBLDB
In: lib/bio/db.rb
lib/bio/db/embl/common.rb
Parent: DB

Stores an EMBL style (EMBL, TrEMBL, Swiss-Prot etc.) entry.

Methods

new  

Classes and Modules

Module Bio::EMBLDB::Common

Public Class methods

new(entry, tagsize)

The entire entry is passed as a String. The length of the tag field is passed as an Integer. Parses the entry roughly by the entry2hash method and returns a database object.

[Source]

     # File lib/bio/db.rb, line 306
306:   def initialize(entry, tagsize)
307:     @tagsize = tagsize
308:     @orig = entry2hash(entry.strip)     # Hash of the original entry
309:     @data = {}                  # Hash of the parsed entry
310:   end

[Validate]