Class Bio::Hinv::KeywordSearch
In: lib/bio/io/hinv.rb
Parent: Object

serv = Bio::Hinv::KeywordSearch.new serv.query("query" => "HIT00002218*", "start" => 1, "end" => 100) puts serv.result puts serv.size puts serv.start puts serv.end

Methods

end   new   query   result   size   start  

Included Modules

Common

Public Class methods

new()

[Source]

     # File lib/bio/io/hinv.rb, line 371
371:       def initialize
372:         @url = BASE_URI + "keyword_search.php"
373:       end

Public Instance methods

end()

[Source]

     # File lib/bio/io/hinv.rb, line 413
413:       def end
414:         @xml.elements['//END'].text.to_i
415:       end
query(hash = {})

[Source]

     # File lib/bio/io/hinv.rb, line 375
375:       def query(hash = {})
376:         default = {
377:           "start" => 1,
378:           "end" => 100
379:         }
380:         options = default.update(hash)
381:         super(options)
382:       end
result()

<?xml version=‘1.0’ encoding=‘UTF-8’?> <HINVDB_SEARCH> 

 <QUERY>HIT00002218*</QUERY>
 <SIZE>8</SIZE>
 <START>1</START>
 <END>8</END>
 <H-INVITATIONAL-ID>HIT000022180</H-INVITATIONAL-ID>
 <H-INVITATIONAL-ID>HIT000022181</H-INVITATIONAL-ID>
 <H-INVITATIONAL-ID>HIT000022183</H-INVITATIONAL-ID>
 <H-INVITATIONAL-ID>HIT000022184</H-INVITATIONAL-ID>
 <H-INVITATIONAL-ID>HIT000022185</H-INVITATIONAL-ID>
 <H-INVITATIONAL-ID>HIT000022186</H-INVITATIONAL-ID>
 <H-INVITATIONAL-ID>HIT000022188</H-INVITATIONAL-ID>
 <H-INVITATIONAL-ID>HIT000022189</H-INVITATIONAL-ID>

</HINVDB_SEARCH>

[Source]

     # File lib/bio/io/hinv.rb, line 399
399:       def result
400:         list = []
401:         @xml.elements.each('//H-INVITATIONAL-ID') do |e|
402:           list << e.text
403:         end
404:         return list
405:       end
size()

[Source]

     # File lib/bio/io/hinv.rb, line 407
407:       def size
408:         @xml.elements['//SIZE'].text.to_i
409:       end
start()

[Source]

     # File lib/bio/io/hinv.rb, line 410
410:       def start
411:         @xml.elements['//START'].text.to_i
412:       end

[Validate]