Class Bio::Spidey::Report::Segment
In: lib/bio/appl/spidey/report.rb
Parent: Object

Segment informations of a segment pair.

Methods

new  

Attributes

from  [R]  start position
seq  [R]  sequence data
strand  [R]  strand information
to  [R]  end position

Public Class methods

new(pos_st, pos_ed, strand = nil, seq = nil)

Creates a new Segment object. It is designed to be called internally from Bio::Spidey::Report::* classes. Users shall not call it directly.

[Source]

     # File lib/bio/appl/spidey/report.rb, line 263
263:         def initialize(pos_st, pos_ed, strand = nil, seq = nil)
264:           @from   = pos_st ? pos_st.to_i : nil
265:           @to     = pos_ed ? pos_ed.to_i : nil
266:           @strand = strand
267:           @seq    = seq
268:         end

[Validate]