bio/io/ensembl.rb - An Ensembl Genome Browser client.

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Description

Client classes for Ensembl Genome Browser.

Examples

 human = Bio::Ensembl.new('Homo_sapiens')
 seq = human.exportview(1, 1000, 100000)
 gff = human.exportview(1, 1000, 100000, ['gene', 'variation', 'genscan'])

 human = Bio::Ensembl.human
 seq = human.exportview(1, 1000, 100000)
 gff = human.exportview(1, 1000, 100000, ['gene'])

 seq = Bio::Ensembl.human.exportview(1, 1000, 100000)
 gff = Bio::Ensembl.human.exportview(1, 1000, 100000, ['gene', 'variation', 'genscan'])

References

• Ensembl www.ensembl.org/

Required files